Package: SvyNom 1.2

Mithat Gonen

SvyNom: Nomograms for Right-Censored Outcomes from Survey Designs

Builds, evaluates and validates a nomogram with survey data and right-censored outcomes. As described in Capanu (2015) <doi:10.18637/jss.v064.c01>, the package contains functions to create the nomogram, validate it using bootstrap, as well as produce the calibration plots.

Authors:Mithat Gonen [aut, cre], Marinela Capanu [aut]

SvyNom_1.2.tar.gz
SvyNom_1.2.zip(r-4.5)SvyNom_1.2.zip(r-4.4)SvyNom_1.2.zip(r-4.3)
SvyNom_1.2.tgz(r-4.4-any)SvyNom_1.2.tgz(r-4.3-any)
SvyNom_1.2.tar.gz(r-4.5-noble)SvyNom_1.2.tar.gz(r-4.4-noble)
SvyNom_1.2.tgz(r-4.4-emscripten)SvyNom_1.2.tgz(r-4.3-emscripten)
SvyNom.pdf |SvyNom.html✨
SvyNom/json (API)
NEWS

# Install 'SvyNom' in R:

install.packages('SvyNom', repos = c('https://mskcc-epi-bio.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/mskcc-epi-bio/svynom/issues

Datasets:

noNA - Gastric cancer case-control study

On CRAN:

nomogram survey

3 exports 1.46 score 84 dependencies 3 mentions 4 scripts 183 downloads

Last updated 2 years agofrom:a96c92bc04. Checks:OK: 7. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Sep 04 2024
R-4.5-win	OK	Sep 04 2024
R-4.5-linux	OK	Sep 04 2024
R-4.4-win	OK	Sep 04 2024
R-4.4-mac	OK	Sep 04 2024
R-4.3-win	OK	Aug 05 2024
R-4.3-mac	OK	Aug 05 2024

Exports:svycox.calibrate svycox.nomogram svycox.validate

Dependencies:backports base64enc bslib cachem checkmate cli cluster codetools colorspace data.table DBI digest evaluate fansi farver fastmap fontawesome foreign Formula fs ggplot2 glue gridExtra gtable highr Hmisc htmlTable htmltools htmlwidgets isoband jquerylib jsonlite knitr labeling lattice lifecycle magrittr MASS Matrix MatrixModels memoise mgcv mime minqa mitools multcomp munsell mvtnorm nlme nnet numDeriv pillar pkgconfig polspline quantreg R6 rappdirs RColorBrewer Rcpp RcppArmadillo rlang rmarkdown rms rpart rstudioapi sandwich sass scales SparseM stringi stringr survey survival TH.data tibble tinytex utf8 vctrs viridis viridisLite withr xfun yaml zoo

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Nomograms for right-censored outcomes with complex survey data	SvyNom-package SvyNom
Gastric cancer case-control study	noNA
Checking the calibration of a nomogram for a survey-weighted Cox model	svycox.calibrate
Builds a nomogram for a survey-weighted Cox model	svycox.nomogram
Validating a nomogram for a survey-weighted Cox model	svycox.validate