{ "_id": "6a48cae7b5e98c40829fc6c0", "Type": "Package", "Package": "SvyNom", "Title": "Nomograms for Right-Censored Outcomes from Survey Designs", "Version": "1.2", "Authors@R": "c(\nperson(\"Mithat\", \"Gonen\", , \"gonenm@mskcc.org\", role = c(\"aut\", \"cre\")),\nperson(\"Marinela\", \"Capanu\", role = \"aut\")\n)", "Description": "Builds, evaluates and validates a nomogram with survey\ndata and right-censored outcomes. As described in Capanu (2015)\n, the package contains functions to\ncreate the nomogram, validate it using bootstrap, as well as\nproduce the calibration plots.", "License": "GPL-2", "URL": "https://github.com/MSKCC-Epi-Bio/SvyNom,\nhttps://mskcc-epi-bio.github.io/SvyNom/", "BugReports": "https://github.com/MSKCC-Epi-Bio/SvyNom/issues", "Encoding": "UTF-8", "LazyLoad": "yes", "Language": "en-US", "Config/pak/sysreqs": "cmake make libicu-dev libuv1-dev", "Repository": "https://mskcc-epi-bio.r-universe.dev", "Date/Publication": "2022-04-28 17:27:13 UTC", "RemoteUrl": "https://github.com/mskcc-epi-bio/svynom", "RemoteRef": "HEAD", "RemoteSha": "a96c92bc0438ea6e4de71deee1f27806ebb9c493", "NeedsCompilation": "no", "Packaged": { "Date": "2026-07-04 08:25:33 UTC", "User": "root" }, "Author": "Mithat Gonen [aut, cre],\nMarinela Capanu [aut]", "Maintainer": "Mithat Gonen ", "_user": "mskcc-epi-bio", "_type": "src", "_file": "SvyNom_1.2.tar.gz", "_fileid": "https://r2.ropensci.org/40e7ac03c0c7638a9876a8ead3bc084b76ba1b5032e3fdb89d7300eea941e398", "_filesize": 120940, "_sha256": "40e7ac03c0c7638a9876a8ead3bc084b76ba1b5032e3fdb89d7300eea941e398", "_expires": "2026-10-12T08:57:10.000Z", "_created": "2026-07-04T08:25:33.000Z", "_published": "2026-07-04T08:57:11.907Z", "_jobs": [ { "job": 85117546106, "time": 168, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "8080037258" }, { "job": 85117546108, "time": 174, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "8080037845" }, { "job": 85117546097, "time": 96, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "8080224890" }, { "job": 85117546096, "time": 103, "config": "macos-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "8080229915" }, { "job": 85117338026, "time": 203, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "8080017239" }, { "job": 85117546095, "time": 146, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "8080034693" }, { "job": 85117546100, "time": 133, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "8080033215" }, { "job": 85117546116, "time": 125, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "8080032325" }, { "job": 85117546099, "time": 111, "config": "windows-release", "r": "4.6.1", "check": "OK", "artifact": "8080030650" } ], "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/mskcc-epi-bio/actions/runs/28700391773", "_status": "success", "_upstream": "https://github.com/mskcc-epi-bio/svynom", "_commit": { "id": "a96c92bc0438ea6e4de71deee1f27806ebb9c493", "author": "Daniel Sjoberg ", "committer": "Daniel Sjoberg ", "message": "updates ahead of cran release\n", "time": 1651166833 }, "_maintainer": { "name": "Mithat Gonen", "email": "gonenm@mskcc.org" }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "Hmisc", "role": "Imports" }, { "package": "rms", "role": "Imports" }, { "package": "survey", "role": "Imports" }, { "package": "survival", "role": "Imports" }, { "package": "spelling", "role": "Suggests" } ], "_owner": "mskcc-epi-bio", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_topics": [ "nomogram", "survey" ], "_stars": 1, "_contributors": [ { "user": "ddsjoberg", "count": 6, "uuid": 26774684 }, { "user": "capanum", "count": 3, "uuid": 104456322 } ], "_userbio": { "uuid": 90927607, "type": "organization", "name": "Dept of Epidemiology and Biostatistics at MSKCC", "followers": 44 }, "_downloads": { "count": 323, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/SvyNom" }, "_mentions": 3, "_devurl": "https://github.com/mskcc-epi-bio/svynom", "_pkgdown": "https://mskcc-epi-bio.github.io/SvyNom/", "_searchresults": 4, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "extra/SvyNom.html", "manual.pdf" ], "_homeurl": "https://github.com/mskcc-epi-bio/svynom", "_realowner": "mskcc-epi-bio", "_cranurl": true, "_releases": [ { "version": "1.0", "date": "2012-12-07" }, { "version": "1.1", "date": "2015-02-24" }, { "version": "1.2", "date": "2022-04-29" } ], "_exports": [ "svycox.calibrate", "svycox.nomogram", "svycox.validate" ], "_datasets": [ { "name": "noNA", "title": "Gastric cancer case-control study", "object": "noNA", "file": "noNA.RData", "class": [ "data.frame" ], "fields": [ "age_dx", "greater_1_m1_site", "ecog_at_m1", "hb_m1", "alb_m1", "survival", "surv_cens", "group", "inv_weight", "lymph_only", "liver_only", "ECOG", "Differentiation", "Alb", "Age", "Hb", "Gt_1_m1site", "ssize" ], "rows": 384, "table": true, "tojson": true } ], "_help": [ { "page": "SvyNom-package", "title": "Nomograms for right-censored outcomes with complex survey data", "topics": [ "SvyNom-package", "SvyNom" ] }, { "page": "noNA", "title": "Gastric cancer case-control study", "topics": [ "noNA" ] }, { "page": "svycox.calibrate", "title": "Checking the calibration of a nomogram for a survey-weighted Cox model", "topics": [ "svycox.calibrate" ] }, { "page": "svycox.nomogram", "title": "Builds a nomogram for a survey-weighted Cox model", "topics": [ "svycox.nomogram" ] }, { "page": "svycox.validate", "title": "Validating a nomogram for a survey-weighted Cox model", "topics": [ "svycox.validate" ] } ], "_readme": "https://github.com/mskcc-epi-bio/svynom/raw/HEAD/README.md", "_rundeps": [ "backports", "base64enc", "bslib", "cachem", "checkmate", "cli", "cluster", "codetools", "colorspace", "cpp11", "data.table", "DBI", "digest", "evaluate", "farver", "fastmap", "fontawesome", "foreign", "Formula", "fs", "ggplot2", "glue", "gridExtra", "gtable", "highr", "Hmisc", "htmlTable", "htmltools", "htmlwidgets", "isoband", "jquerylib", "jsonlite", "knitr", "labeling", "lattice", "lifecycle", "magrittr", "MASS", "Matrix", "MatrixModels", "memoise", "mime", "minqa", "mitools", "multcomp", "mvtnorm", "nlme", "nnet", "numDeriv", "polspline", "quantreg", "R6", "rappdirs", "RColorBrewer", "Rcpp", "RcppArmadillo", "rlang", "rmarkdown", "rms", "rpart", "rstudioapi", "S7", "sandwich", "sass", "scales", "SparseM", "stringi", "stringr", "survey", "survival", "TH.data", "tinytex", "vctrs", "viridisLite", "withr", "xfun", "yaml", "zoo" ], "_score": 3.1760912590556813, "_indexed": true, "_nocasepkg": "svynom", "_universes": [ "mskcc-epi-bio" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.2", "date": "2026-07-04T08:27:57.000Z", "distro": "resolute", "commit": "a96c92bc0438ea6e4de71deee1f27806ebb9c493", "fileid": "https://r2.ropensci.org/6419f0009701b3d29eee21b9c165e4b5eed219e47bcb4b687256b9ce50356042", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mskcc-epi-bio/actions/runs/28700391773" }, { "r": "4.6.1", "os": "linux", "version": "1.2", "date": "2026-07-04T08:28:00.000Z", "distro": "resolute", "commit": "a96c92bc0438ea6e4de71deee1f27806ebb9c493", "fileid": "https://r2.ropensci.org/da87fe1a4a0452cfc90c0990718827186192e80f5e0991c52735918c055033ed", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mskcc-epi-bio/actions/runs/28700391773" }, { "r": "4.5.3", "os": "mac", "version": "1.2", "date": "2026-07-04T08:55:42.000Z", "commit": "a96c92bc0438ea6e4de71deee1f27806ebb9c493", "fileid": "https://r2.ropensci.org/91d0920bd6625802b05dc33f9428ff9eef0339fe25aa870a39a7871e6ac43483", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mskcc-epi-bio/actions/runs/28700391773" }, { "r": "4.6.1", "os": "mac", "version": "1.2", "date": "2026-07-04T08:56:20.000Z", "commit": "a96c92bc0438ea6e4de71deee1f27806ebb9c493", "fileid": "https://r2.ropensci.org/b80901499096cff607f7fb4a4f0e5c47f6a4cbfe099b98e67407205436b7176e", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mskcc-epi-bio/actions/runs/28700391773" }, { "r": "4.6.0", "os": "wasm", "version": "1.2", "date": "2026-07-04T08:28:21.000Z", "commit": "a96c92bc0438ea6e4de71deee1f27806ebb9c493", "fileid": "https://r2.ropensci.org/8f56f235f92039fcb0b757ef9257e0710ed208ce27eeffa091a7f079fe66467b", "status": "success", "buildurl": "https://github.com/r-universe/mskcc-epi-bio/actions/runs/28700391773" }, { "r": "4.7.0", "os": "win", "version": "1.2", "date": "2026-07-04T08:27:08.000Z", "commit": "a96c92bc0438ea6e4de71deee1f27806ebb9c493", "fileid": "https://r2.ropensci.org/1bb9b0fc59d60d66044c20f4e4e7ad3d2db383bb371df2e022b2e9ac6df1e6d9", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mskcc-epi-bio/actions/runs/28700391773" }, { "r": "4.5.3", "os": "win", "version": "1.2", "date": "2026-07-04T08:27:05.000Z", "commit": "a96c92bc0438ea6e4de71deee1f27806ebb9c493", "fileid": "https://r2.ropensci.org/b461e552026b547a6b38a203680500736d04518d03ce46688598ea010af6a074", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mskcc-epi-bio/actions/runs/28700391773" }, { "r": "4.6.1", "os": "win", "version": "1.2", "date": "2026-07-04T08:26:53.000Z", "commit": "a96c92bc0438ea6e4de71deee1f27806ebb9c493", "fileid": "https://r2.ropensci.org/e2f87a5d311c6e990fb333eb51e4558ca4848d516d88af39814308a82a029e35", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/mskcc-epi-bio/actions/runs/28700391773" } ] }